
Colorectal cancer is the third most common type of newly diagnosed cancer in Australia. It is estimated that 30% of patients with colorectal cancer have a family history of the disease, and up to 10% have genomic variants associated with inherited cancer syndromes including Lynch syndrome and inherited polyposis syndromes.
Identification of an inherited colorectal cancer syndrome has important implications for personalised cancer risk assessment, surviellance, treatment decisions and cascade testing of family members.
MBS rebated diagnostic and predictive testing for the genes associated with these syndromes is now available for patients who meet criteria and when requested by a specialist medical practitioner. While clinical guidelines recommend germline testing for individuals with a ≥5% risk of Lynch syndrome (as calculated by validated risk prediction models), current MBS criteria require a risk of ≥10%.
Detection of pathogenic variants in genes associated with inherited colorectal cancer syndromes:
We offer a comprehensive suite of germline testing panels to support the diagnosis of inherited colorectal cancer syndromes.
Lynch syndrome is one of the most common cancer predisposition syndromes, and confers a significantly increased lifetime risk of colorectal cancer, endometrial cancer and multiple other cancers. A diagnosis of Lynch Syndrome is confirmed by the detection of a pathogenic germline variant in one of the MMR genes, which are found in our BRAoVO Lynch panel.
We now offer a comprehensive polyposis panel that includes genes associated with both adenomatous and non‑adenomatous polyposis syndromes. This panel is suitable for individuals with multiple colorectal polyps where the underlying cause is uncertain, or where a broad assessment of inherited polyposis is clinically indicated. This panel enables assessment of autosomal dominant and recessive polyposis syndromes, including attenuated presentations and non‑adenomatous phenotypes.
For patients with colorectal and/or endometrial cancer where the clinical presentation does not clearly fit a single syndrome, we offer a colorectal/endometrial cancer panel. This broader panel includes genes associated with inherited susceptibility to colorectal and endometrial cancers beyond classical Lynch syndrome. This panel supports comprehensive evaluation in individuals with cancer diagnoses, overlapping clinical features, or complex family histories.
Talk to your patient about their options, perform pre-test genetic counselling (if required) and request a test.
Have your patient visit one of our collection centres to get their sample collected.
Discuss the results with your patient and advise genetic counselling if necessary.
Genetic testing for inherited cancer is a complex process that generates results that can have significant medical and psychological implications for patients and their families. As part of our laboratory accreditation, Genomic Diagnostics must ensure that patients receive appropriate genetic counselling for this type of testing.
Genetic counselling involves discussing benefits, limitations and the possible consequences of the genetic testing to be performed. It can be provided by a specialist or a qualified genetic counsellor and must be undertaken before the patient undergoes testing.
Strategies to identify individuals at risk of Lynch syndrome or individuals who should have germline testing for Lynch syndrome have evolved over time. Prediction models are evidence-based tools that use personal and family history to determine the risk that an individual is a carrier of a pathogenic variant in a gene associated with Lynch syndrome.
The models available for Lynch syndrome are:
The Medicare schedule currently contains four item numbers relevant to inherited colorectal cancer syndromes.
These are only rebatable if requested through a specialist and if the patient meets the criteria set out in them.
In summary:
MBS #73354 – diagnostic testing for Lynch syndrome in individuals with colorectal or endometrial cancer. In colorectal cancer, the patient must have demonstrated loss by IHC of MMR protein in solid tumour tissue. In endometrial cancer, the patient must be at a risk of >10% of having Lynch syndrome.
MBS # 73355 – diagnostic testing for individuals with FAP/MAP where the patient is assessed as being at a risk of >10% of having FAP or MAP.
MBS # 73356 - diagnostic testing for a patient with non-adenomatous polyposis who is at a risk of >10% of having juvenile polyposis syndrome, Peutz-Jeghers syndrome or hereditary mixed polyposis syndrome.
MBS #73357 – predictive familial cancer test for a single gene variant where a family member has been identified as having this variant. A report from the family member stating the exact details of the variant must be supplied.